#Pipeline toolbox software portable#
Compi - Application framework for portable computational pipelines.Clusterjob - Automated reproducibility, and hassle-free submission of computational jobs to clusters.Cluster Flow - Command-line tool which uses common cluster managers to run bioinformatics pipelines.Briefly - Python Meta-programming Library for Job Flow Control.Bpipe - Tool for running and managing bioinformatics pipelines.Bistro - Library to build and execute typed scientific workflows.Bioshake - Haskell DSL built on shake with strong typing and EDAM support.BioQueue - Explicit framework with web monitoring and resource estimation.BioMake - GNU-Make-like utility for managing builds and complex workflows.Bds - Scripting language for data pipelines.Balsam - Python-based high throughput task and workflow engine.AWE - Workflow and resource management system with CWL support.Antha - High-level language for biology.Anduril - Component-based workflow framework for scientific data analysis.Airflow - Python-based workflow system created by AirBnb.AiiDA - workflow manager with a strong focus on provenance, performance and extensibility.Adage - Small package to describe workflows that are not completely known at definition time.ActionChain - A workflow system for simple linear success/failure workflows.A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin Pipeline frameworks & libraries
0 kommentar(er)
